Tubulin Binding Constants of Hemiasterlins et al.

Tubulin comprises 20 Cys residues, the sulfhydryls of which are all reduced in native tubulin. Tubulin bioactivity, measured by polymerization or drug binding, is reduced by reaction with a small number of these -SH groups, some implicated in drug binding to either the colchicine or vinca sites.

Sulfhydryls react with DTNB (dithio-bis-nitrobenzoic acid) to produce TNB-, the absorbance of which is easily monitored. Experiments (not shown) indicate that all 20 of tubulin's -SHs are reactive; moreover, denaturants (urea, guanidine HCl) increase the reaction kinetics, unfolding tubulin to expose -SHs. Thus, small perturbations in tubulin's structure are manifested in altered -SH reactivity.

In contrast to the case for denaturants, the kinetic suppression of this reactivity was used to examine drug effects on tubulin. Following incubation of tubulin ± drug, DTNB is introduced, and kinetic reaction curves like Plot A result. When slopes from such curves are plotted versus [drug], non-linear regression fitting produces binding curves, as in Plot B. Computer models return binding constants for the fitted data.

hemiasterlin Kd ~ 0.33 mM
hemiasterlin A Kd ~ 0.38 mM
hemiasterlin C Kd ~ 0.95 mM
dolastatin 10 Kd ~ 0.21 mM
cryptophycin A Kd ~ 0.30 mM
vinblastine Kd >>~ 6 mM
podophyllotoxin Kd ~ 2.10 mM
nocodazole Kd ~ 1.80 mM
   

Most, but not all, anti-microtubule drugs lower -SH reactivity.

 

DETAILS: In base buffer of 0.1 M MES, pH 6.9, 0.5 mM MgCl2, purified brain tubulin (0.7-4.0 mM) was incubated ± drug, 15 minutes, room T°, then DTNB added to 100 mM and A412 recorded ~30 minutes. Minus tubulin controls show no DA412. Approximately the first three -SHs react more rapidly than the remainder (which have similar reactivities), so slopes between 5 and 10 minutes were used in non-linear hyperbolic regression (one site binding saturation curve; Prizm software) versus [drug]. Bmax and Kd are returned from which the reported Kd is derived by subtracting ½[tubulin].



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